_already_set_up (defined in stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > >) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | protected |
accumulate_Hessian_times_input(DiscretisedDensity< 3, elemT > &output, const DiscretisedDensity< 3, elemT > ¤t_estimate, const DiscretisedDensity< 3, elemT > &input) const | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | virtual |
add_multiplication_with_approximate_Hessian(DiscretisedDensity< 3, elemT > &output, const DiscretisedDensity< 3, elemT > &input) const | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | virtual |
alpha (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | protected |
anatomical_filename (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | protected |
ask_parameters() (defined in stir::ParsingObject) | stir::ParsingObject | |
ask_type_and_parameters() | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinestatic |
check(DiscretisedDensity< 3, elemT > const ¤t_image_estimate) const override | stir::PLSPrior< elemT > | protected |
RegisteredParsingObject< PLSPrior< elemT >, GeneralisedPrior< DiscretisedDensity< 3, elemT > >, GeneralisedPrior< DiscretisedDensity< 3, elemT > > >::check(DiscretisedDensity< 3, elemT > const ¤t_estimate) const | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | protectedvirtual |
compute_gradient(DiscretisedDensity< 3, elemT > &prior_gradient, const DiscretisedDensity< 3, elemT > ¤t_image_estimate) override | stir::PLSPrior< elemT > | virtual |
compute_Hessian(DiscretisedDensity< 3, elemT > &prior_Hessian_for_single_densel, const BasicCoordinate< 3, int > &coords, const DiscretisedDensity< 3, elemT > ¤t_image_estimate) const | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | virtual |
compute_value(const DiscretisedDensity< 3, elemT > ¤t_image_estimate) override | stir::PLSPrior< elemT > | virtual |
eta (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | protected |
GeneralisedPrior() (defined in stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > >) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | inline |
get_alpha() const (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | |
get_anatomical_grad_sptr(int direction) const (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | |
get_anatomical_image_sptr() const | stir::PLSPrior< elemT > | |
get_eta() const | stir::PLSPrior< elemT > | |
get_kappa_sptr() const | stir::PLSPrior< elemT > | |
get_norm_sptr() const (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | |
get_only_2D() | stir::PLSPrior< elemT > | inline |
get_penalisation_factor() const (defined in stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > >) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | inline |
get_registered_name() const override | stir::RegisteredParsingObject< PLSPrior< elemT >, GeneralisedPrior< DiscretisedDensity< 3, elemT > >, GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinevirtual |
gradient_filename_prefix | stir::PLSPrior< elemT > | protected |
initialise_keymap() override | stir::PLSPrior< elemT > | protectedvirtual |
is_convex() const override | stir::PLSPrior< elemT > | virtual |
kappa_filename | stir::PLSPrior< elemT > | protected |
list_registered_names(std::ostream &stream) | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinestatic |
only_2D | stir::PLSPrior< elemT > | protected |
operator=(const ParsingObject &) (defined in stir::ParsingObject) | stir::ParsingObject | |
parameter_info() override | stir::RegisteredParsingObject< PLSPrior< elemT >, GeneralisedPrior< DiscretisedDensity< 3, elemT > >, GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinevirtual |
parse(std::istream &f) (defined in stir::ParsingObject) | stir::ParsingObject | |
parse(const char *const filename) (defined in stir::ParsingObject) | stir::ParsingObject | |
parser (defined in stir::ParsingObject) | stir::ParsingObject | protected |
ParsingObject() (defined in stir::ParsingObject) | stir::ParsingObject | |
ParsingObject(const ParsingObject &) (defined in stir::ParsingObject) | stir::ParsingObject | |
penalisation_factor (defined in stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > >) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | protected |
PLSPrior() | stir::PLSPrior< elemT > | |
PLSPrior(const bool only_2D, float penalization_factor) | stir::PLSPrior< elemT > | |
post_processing() override | stir::PLSPrior< elemT > | protectedvirtual |
read_from_stream(std::istream *) | stir::RegisteredParsingObject< PLSPrior< elemT >, GeneralisedPrior< DiscretisedDensity< 3, elemT > >, GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinestatic |
read_registered_object(std::istream *in, const std::string ®istered_name) | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlinestatic |
registered_name | stir::PLSPrior< elemT > | static |
registered_name (defined in stir::PLSPrior< elemT >) | stir::PLSPrior< elemT > | |
RegisteredObject() (defined in stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > >) | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inline |
registry() | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | inlineprotectedstatic |
RegistryType typedef | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | protected |
RootFactory typedef | stir::RegisteredObject< GeneralisedPrior< DiscretisedDensity< 3, elemT > > > | protected |
set_alpha(const double) | stir::PLSPrior< elemT > | |
set_anatomical_filename(const std::string &filename) | stir::PLSPrior< elemT > | |
set_anatomical_image_sptr(const shared_ptr< const DiscretisedDensity< 3, elemT >> &) | stir::PLSPrior< elemT > | |
set_defaults() override | stir::PLSPrior< elemT > | protectedvirtual |
set_eta(const double) | stir::PLSPrior< elemT > | |
set_kappa_filename(const std::string &filename) | stir::PLSPrior< elemT > | |
set_kappa_sptr(const shared_ptr< const DiscretisedDensity< 3, elemT >> &) | stir::PLSPrior< elemT > | |
set_key_values() | stir::ParsingObject | protectedvirtual |
set_only_2D(const bool arg) | stir::PLSPrior< elemT > | inline |
set_penalisation_factor(float new_penalisation_factor) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | inline |
set_up(shared_ptr< const DiscretisedDensity< 3, elemT >> const &target_sptr) override | stir::PLSPrior< elemT > | |
RegisteredParsingObject< PLSPrior< elemT >, GeneralisedPrior< DiscretisedDensity< 3, elemT > >, GeneralisedPrior< DiscretisedDensity< 3, elemT > > >::set_up(shared_ptr< const DiscretisedDensity< 3, elemT > > const &target_sptr) | stir::GeneralisedPrior< DiscretisedDensity< 3, elemT > > | virtual |
~ParsingObject() (defined in stir::ParsingObject) | stir::ParsingObject | inlinevirtual |
~RegisteredObjectBase() override (defined in stir::RegisteredObjectBase) | stir::RegisteredObjectBase | inline |