A class for reading singles over the number of time samples from an GE HDF5 .BLF listmode file format. More...
#include "stir/data/SinglesRatesFromGEHDF5.h"
Inheritance diagram for stir::GE::RDF_HDF5::SinglesRatesFromGEHDF5:
Public Member Functions | |
| SinglesRatesFromGEHDF5 () | |
| Default constructor. | |
| SinglesRatesFromGEHDF5 (const std::string &rdf_filename) | |
| construct from filename | |
| void | read_from_file (const std::string &rdf_filename) |
 Public Member Functions inherited from stir::RegisteredParsingObject< SinglesRatesFromGEHDF5, SinglesRates, SinglesRatesForTimeSlices > | |
| std::string | get_registered_name () const override |
| Returns Derived::registered_name. | |
| std::string | parameter_info () override |
| Returns a string with all parameters and their values, in a form suitable for parsing again. | |
| Public Member Functions inherited from stir::SinglesRatesForTimeSlices | |
| SinglesRatesForTimeSlices () | |
| Default constructor. | |
| float | get_singles (const int singles_bin_index, const double start_time, const double end_time) const override |
| Get the number of singles for a particular singles unit and a frame with the specified start and end times. More... | |
| FrameSinglesRates STIR_DEPRECATED | get_rates_for_frame (double start_time, double end_time) const |
| Generate a FramesSinglesRate - containing the average rates. | |
| virtual int | get_end_time_slice_index (double t) const |
| virtual int | get_start_time_slice_index (double t) const |
| void | set_singles (int singles_bin_index, int time_slice, int new_singles) |
| Set a singles by singles bin index and time slice. | |
| int | rebin (std::vector< double > &new_end_times) |
| Rebin the sgl slices into a different set of consecutive slices. | |
| std::vector< double > | get_times () const |
| Get the vector of time values for each time slice index. | |
| int | get_num_time_slices () const |
| Return the number of time slices. | |
| double | get_singles_time_interval () const |
| Return the time interval per slice of singles data. | |
| TimeFrameDefinitions | get_time_frame_definitions () const |
| return time-intervals for every slice | |
| Public Member Functions inherited from stir::SinglesRates | |
| virtual float | get_singles_rate (const int singles_bin_index, const double start_time, const double end_time) const |
| Get the (average) singles rate for a particular singles unit and a frame with the specified start and end times. More... | |
| virtual float | get_singles_rate (const DetectionPosition<> &det_pos, const double start_time, const double end_time) const |
| Virtual function that returns the average singles rate given the detection positions and time-interval of detection. More... | |
| virtual float | get_singles (const DetectionPosition<> &det_pos, const double start_time, const double end_time) const |
| Virtual function that returns the number of singles given the detection positions and time-interval of detection. More... | |
| const Scanner * | get_scanner_ptr () const |
| Get the scanner pointer. | |
| Public Member Functions inherited from stir::ParsingObject | |
| ParsingObject (const ParsingObject &) | |
| ParsingObject & | operator= (const ParsingObject &) |
| void | ask_parameters () |
| bool | parse (std::istream &f) |
| bool | parse (const char *const filename) |
Static Public Attributes | |
| static const char *const | registered_name = "SinglesRatesFromGEHDF5" |
| Name which will be used when parsing a SinglesRatesFromGEHDF5 object. | |
Additional Inherited Members | |
| Static Public Member Functions inherited from stir::RegisteredParsingObject< SinglesRatesFromGEHDF5, SinglesRates, SinglesRatesForTimeSlices > | |
| static SinglesRates * | read_from_stream (std::istream *) |
| Construct a new object (of type Derived) by parsing the istream. More... | |
| Static Public Member Functions inherited from stir::RegisteredObject< SinglesRates > | |
| static SinglesRates * | read_registered_object (std::istream *in, const std::string ®istered_name) |
| Construct a new object (of a type derived from Root, its actual type determined by the registered_name parameter) by parsing the istream. More... | |
| static SinglesRates * | ask_type_and_parameters () |
| ask the user for the type, and then calls read_registered_object(0, type) More... | |
| static void | list_registered_names (std::ostream &stream) |
| List all possible registered names to the stream. More... | |
| Protected Types inherited from stir::RegisteredObject< SinglesRates > | |
| typedef SinglesRates *(* | RootFactory) (std::istream *) |
| The type of a root factory is a function, taking an istream* as argument, and returning a Root*. | |
| typedef FactoryRegistry< std::string, RootFactory, interfile_less > | RegistryType |
| The type of the registry. | |
| Protected Member Functions inherited from stir::SinglesRatesForTimeSlices | |
| void | set_time_interval () |
| Calculate and set _singles_time_interval from _times. | |
| double | get_slice_start_time (int slice_index) const |
| get slice start time. | |
| Protected Member Functions inherited from stir::ParsingObject | |
| virtual void | set_key_values () |
| This will be called before parsing or parameter_info is called. More... | |
| Static Protected Member Functions inherited from stir::RegisteredObject< SinglesRates > | |
| static RegistryType & | registry () |
| Static function returning the registry. More... | |
| Protected Attributes inherited from stir::SinglesRatesForTimeSlices | |
| Array< 2, int > | _singles |
| total singles per time slice and singles-bin More... | |
| std::vector< double > | _times |
| end times of each time slice (in secs) More... | |
| int | _num_time_slices |
| double | _singles_time_interval |
| time interval in secs More... | |
| Protected Attributes inherited from stir::SinglesRates | |
| shared_ptr< Scanner > | scanner_sptr |
| Generate a FramesSinglesRate - containing the average rates. | |
| Protected Attributes inherited from stir::ParsingObject | |
| KeyParser | parser |
Detailed Description
A class for reading singles over the number of time samples from an GE HDF5 .BLF listmode file format.
.BLF files are generated as a result of PET scan by GE SIGNA PET/MR scanners.
The documentation for this class was generated from the following files:
- /home/sirfuser/devel/STIRdistrib/STIR/src/include/stir/data/SinglesRatesFromGEHDF5.h
- /home/sirfuser/devel/STIRdistrib/STIR/src/data_buildblock/SinglesRatesFromGEHDF5.cxx
