utilities Directory Reference

Directory dependency graph for utilities:

Files
	add_ecat7_header_to_sgl.cxx
	Prepend contents of ECAT7 header to a new sgl file (from list mode acquisition)
	add_side_shields.cxx
	A preliminary utility to add side shields to an attenuation image.
	add_time_frame_info.cxx
	Add the Time Frame Information to Dynamic Images.
	apply_plane_rescale_factors.cxx
	This program rescales planes of an image according to a file with scale factors.
	Bland_Altman_plot.cxx
	Writes the Bland-Altman values for two images in a text file.
	change_mhead_file_type.cxx
	A small utility that changes the file type in an ECAT7 main header.
	CoG.cxx
	This program computes the centre of gravity in each plane and writes its coordinates to file, together with a weight for each plane.
	compute_gradient.cxx
	compute_plane_rescale_factors.cxx
	This programme finds plane rescaling factors.
	create_normfactors.cxx
	Create sample normalisation factors for the ML approach to normalisation.
	create_normfactors3D.cxx
	Create sample normalisation factors for the ML approach to normalisation.
	fillwith1.cxx
	A utility that just fills the projection data with 1.
	fillwithotherprojdata.cxx
	A utility that just fills the projection data with input from somewhere else. Only useful when the first file is an a different file format (i.e. ECAT 7)
	find_sinogram_rescaling_factors.cxx
	Find sinogram rescaling factors.
	fit_cylinder.cxx
	image_flip_x.cxx
	A preliminary utility to flip the x-axis of an image.
	interpolate_blocks.cxx
	A utility to set data corresponding to a certain detector block by interpolating from neighbouring data.
	interpolate_projdata.cxx
	Interpolate projdata using BSplines.
	inverse_proj_data.cxx
	Find the inverse of ProjData.
	inverse_SSRB.cxx
	Create 4D projdata from 3D using stir::inverse_SSRB.
	line_profiles_through_projdata.cxx
	Extracting profiles from projection data.
	list_TAC_ROI_values.cxx
	Utility program for getting TAC for ROI values.
	make_grid_image.cxx
	This program creates a simple grid image.
	normalizedbckproj.cxx
	This programm was based on bck_project originnal code with the difference that here we normalize the final value of a single pixel with a sum of all values in the corresponding LOR.
	prepare_projdata.cxx
	A utility preparing some projection data for further processing with iterative reconstructions. See stir::PrepareProjData.
	remove_sinograms.cxx
	A utility to remove (or add) some sinograms at the end of each segment.
	set_blocks_to_value.cxx
	A utility to set data corresponding to a certain detector block to a desired value.
	shift_projdata_along_axis.cxx
	A utility to shift projection data along the axial direction.
	show_ecat7_header.cxx
	Show contents of ECAT7 header.
	threshold_norm_data.cxx
	Threshold normalisation data.
	zero_projdata_from_norm.cxx
	Zero projection data when corresponding normalisation factors are too high.