STIR  6.2.0
Public Member Functions | Static Public Attributes | Protected Member Functions | List of all members
stir::InputStreamWithRecordsFromUPENNtxt Class Reference

Class for reading listmode files in text format from the PENNPet Explorer scanner. More...

#include "stir/IO/InputStreamWithRecordsFromUPENNtxt.h"

Inheritance diagram for stir::InputStreamWithRecordsFromUPENNtxt:
Inheritance graph
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Public Member Functions

virtual Succeeded create_output_file (const std::string ofilename)
 
virtual Succeeded set_up ()
 Must be called before calling for the first event.
 
virtual std::string method_info () const
 gives method information
 
virtual Succeeded get_next_record (CListRecordPENN &record)
 
virtual Succeeded reset ()
 go back to starting position
 
virtual SavedPosition save_get_position ()
 save current "get" position in an internal array More...
 
virtual Succeeded set_get_position (const SavedPosition &)
 set current "get" position to previously saved value
 
std::istream & get_stream ()
 
virtual void set_current_record ()
 
virtual void set_new_record (const bool &d, const short int &_dt, const unsigned short int &_xa, const unsigned short int &_xb, const unsigned short int &_za, const unsigned short int &_zb, const unsigned short int &_ea, const unsigned short int &_eb)
 
- Public Member Functions inherited from stir::RegisteredParsingObject< InputStreamWithRecordsFromUPENNtxt, InputStreamWithRecordsFromUPENN, InputStreamWithRecordsFromUPENN >
std::string get_registered_name () const override
 Returns Derived::registered_name.
 
std::string parameter_info () override
 Returns a string with all parameters and their values, in a form suitable for parsing again.
 
- Public Member Functions inherited from stir::InputStreamWithRecordsFromUPENN
unsigned long int get_total_number_of_events (CListRecordPENN &record)
 
std::vector< std::streampos > get_saved_get_positions () const
 
void set_saved_get_positions (const std::vector< std::streampos > &)
 
std::streambuf & get_stream ()
 
- Public Member Functions inherited from stir::ParsingObject
 ParsingObject (const ParsingObject &)
 
ParsingObjectoperator= (const ParsingObject &)
 
void ask_parameters ()
 
bool parse (std::istream &f)
 
bool parse (const char *const filename)
 

Static Public Attributes

static const char *const registered_name = "UPENN_txt_listmode"
 

Protected Member Functions

virtual void set_defaults ()
 Set defaults before parsing.
 
virtual void initialise_keymap ()
 Initialise all keywords.
 
virtual bool post_processing ()
 This will be called at the end of the parsing. More...
 
- Protected Member Functions inherited from stir::ParsingObject
virtual void set_key_values ()
 This will be called before parsing or parameter_info is called. More...
 

Additional Inherited Members

- Public Types inherited from stir::InputStreamWithRecordsFromUPENN
typedef std::vector< long long int >::size_type SavedPosition
 
- Static Public Member Functions inherited from stir::RegisteredParsingObject< InputStreamWithRecordsFromUPENNtxt, InputStreamWithRecordsFromUPENN, InputStreamWithRecordsFromUPENN >
static InputStreamWithRecordsFromUPENNread_from_stream (std::istream *)
 Construct a new object (of type Derived) by parsing the istream. More...
 
- Static Public Member Functions inherited from stir::RegisteredObject< InputStreamWithRecordsFromUPENN >
static InputStreamWithRecordsFromUPENNread_registered_object (std::istream *in, const std::string &registered_name)
 Construct a new object (of a type derived from Root, its actual type determined by the registered_name parameter) by parsing the istream. More...
 
static InputStreamWithRecordsFromUPENNask_type_and_parameters ()
 ask the user for the type, and then calls read_registered_object(0, type) More...
 
static void list_registered_names (std::ostream &stream)
 List all possible registered names to the stream. More...
 
- Protected Types inherited from stir::RegisteredObject< InputStreamWithRecordsFromUPENN >
typedef InputStreamWithRecordsFromUPENN *(* RootFactory) (std::istream *)
 The type of a root factory is a function, taking an istream* as argument, and returning a Root*.
 
typedef FactoryRegistry< std::string, RootFactory, interfile_lessRegistryType
 The type of the registry.
 
- Static Protected Member Functions inherited from stir::RegisteredObject< InputStreamWithRecordsFromUPENN >
static RegistryTyperegistry ()
 Static function returning the registry. More...
 
- Protected Attributes inherited from stir::InputStreamWithRecordsFromUPENN
std::string filename
 
std::streampos starting_stream_position
 
std::vector< std::streampos > saved_get_positions
 
const uint8_t * current_record
 
int eventSize = 0
 
int low_energy_window = 0
 
int up_energy_window = 1000
 
int timeout = 0
 
long unsigned int N
 Total number of events.
 
long unsigned int abrupt_counter
 Stop after a predefined number of records, regardless of their type.
 
bool has_output = false
 This is a flag about a low lever function that replicates a listmode file preserving control records that are skipped in normal operations.
 
bool abrupt_stop
 This is a lower counter to abruptly stop the listmode file.
 
int minE_chan
 Minimum energy channel.
 
int maxE_chan
 Maximum energy channel.
 
bool keep_prompt
 In some processes it might be better to filter prompts and delayeds early.
 
bool keep_delayed
 In some processes it might be better to filter prompts and delayeds early.
 
- Protected Attributes inherited from stir::ParsingObject
KeyParser parser
 

Detailed Description

Class for reading listmode files in text format from the PENNPet Explorer scanner.

Todo:
write functions

Member Function Documentation

◆ save_get_position()

InputStreamWithRecordsFromUPENNtxt::SavedPosition stir::InputStreamWithRecordsFromUPENNtxt::save_get_position ( )
virtual

save current "get" position in an internal array

Returns
an "index" into the array that allows you to go back.
See also
set_get_position

Implements stir::InputStreamWithRecordsFromUPENN.

References stir::error().

◆ post_processing()

bool stir::InputStreamWithRecordsFromUPENNtxt::post_processing ( )
protectedvirtual

This will be called at the end of the parsing.

Returns
false if everything OK, true if not

Reimplemented from stir::InputStreamWithRecordsFromUPENN.


The documentation for this class was generated from the following files: