Here is a list of all documented class members with links to the class documentation for each member:

- r -

• radii : stir::Ellipsoid
• Radionuclide() : stir::Radionuclide
• radius_x : stir::EllipsoidalCylinder
• radius_y : stir::EllipsoidalCylinder
• randomise_subset_order : stir::IterativeReconstruction< TargetT >
• randomly_place_scatter_points : stir::ScatterSimulation
• read_blood_frame_data() : stir::BloodFrameData
• read_detectormap_from_file() : stir::DetectorCoordinateMap
• read_from_file() : stir::DiscretisedDensity< num_dimensions, elemT >, stir::ecat::ecat6::ECAT6ImageInputFileFormat, stir::ecat::ecat7::ECAT7DynamicDiscretisedDensityInputFileFormat, stir::ecat::ecat7::ECAT7ImageInputFileFormat, stir::ecat::ecat7::ECAT962ListmodeInputFileFormat, stir::ecat::ecat7::ECAT966ListmodeInputFileFormat, stir::ecat::ECAT8_32bitListmodeInputFileFormat, stir::GE::RDF_HDF5::GEHDF5ListmodeInputFileFormat, stir::InputFileFormat< DataT >, stir::InterfileDynamicDiscretisedDensityInputFileFormat, stir::InterfileImageInputFileFormat, stir::InterfileParametricDiscretisedDensityInputFileFormat, stir::ITKImageInputFileFormat< STIRImageType >, stir::ModelMatrix< num_param >, stir::MultiDynamicDiscretisedDensityInputFileFormat, stir::MultiParametricDiscretisedDensityInputFileFormat, stir::ParametricDiscretisedDensity< DiscDensT >, stir::PENNListmodeInputFileFormat, stir::ProjData, stir::ProjDataInMemory, stir::ROOTListmodeInputFileFormat, stir::SAFIRCListmodeInputFileFormat< EventDataType >
• read_from_files() : stir::GatedSpatialTransformation
• read_from_stream() : stir::RegisteredParsingObject< Derived, Base, Parent >
• read_gdef_file() : stir::TimeGateDefinitions
• read_image_data_types() : stir::InterfileImageHeader
• read_list_data() : stir::GE::RDF_HDF5::GEHDF5Wrapper
• read_optional_root_fields : stir::InputStreamFromROOTFile
• read_plasma_data() : stir::PlasmaData
• read_registered_object() : stir::RegisteredObject< Root >
• read_singles() : stir::GE::RDF_HDF5::GEHDF5Wrapper
• read_singles_from_file() : stir::ecat::ecat7::SinglesRatesFromECAT7
• read_singles_from_sgl_file() : stir::ecat::ecat7::SinglesRatesFromSglFile
• ReadGiplHeader() : Image
• rebin() : stir::FourierRebinning, stir::ProjDataRebinning, stir::SinglesRatesForTimeSlices
• recompute_atten_projdata : stir::ScatterEstimation
• recompute_cache : stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeData< TargetT >
• recompute_mask_image : stir::ScatterEstimation
• recompute_mask_projdata : stir::ScatterEstimation
• recon_template_par_filename : stir::ScatterEstimation
• reconstruct() : stir::AnalyticReconstruction, stir::IterativeReconstruction< TargetT >, stir::Reconstruction< TargetT >, stir::ReconstructionTests< TargetT >
• Reconstruction() : stir::Reconstruction< TargetT >
• reconstruction_template_sptr : stir::ScatterEstimation
• ReconstructionTests() : stir::ReconstructionTests< TargetT >
• recycle() : stir::VectorWithOffset< T >
• reduce_memory_usage : stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeData< TargetT >
• reduce_segment_range() : stir::ProjDataInfo, stir::ProjDataInfoCylindrical, stir::ProjDataInfoSubsetByView
• reference_position_is_average_position_in_frame : stir::LmToProjDataWithMC
• registered_name : stir::AbsTimeIntervalFromDynamicData, stir::AbsTimeIntervalFromECAT7ACF, stir::AbsTimeIntervalWithParsing, stir::BackProjectorByBinNiftyPET, stir::BackProjectorByBinParallelproj, stir::BackProjectorByBinUsingInterpolation, stir::BackProjectorByBinUsingProjMatrixByBin, stir::BinNormalisationFromAttenuationImage, stir::BinNormalisationFromML2D, stir::BinNormalisationFromProjData, stir::BinNormalisationSinogramRescaling, stir::Box3D, stir::ChainedBinNormalisation, stir::DiscretisedShape3D, stir::ecat::BinNormalisationFromECAT8, stir::ecat::ecat6::ECAT6OutputFileFormat, stir::ecat::ecat7::BinNormalisationFromECAT7, stir::ecat::ecat7::ECAT7DynamicDiscretisedDensityOutputFileFormat, stir::ecat::ecat7::ECAT7OutputFileFormat, stir::ecat::ecat7::ECAT7ParametricDensityOutputFileFormat< DiscretisedDensityT >, stir::ecat::ecat7::SinglesRatesFromECAT7, stir::ecat::ecat7::SinglesRatesFromSglFile, stir::Ellipsoid, stir::EllipsoidalCylinder, stir::FBP2DReconstruction, stir::FBP3DRPReconstruction, stir::FilterRootPrior< DataT >, stir::ForwardProjectorByBinNiftyPET, stir::ForwardProjectorByBinParallelproj, stir::ForwardProjectorByBinUsingProjMatrixByBin, stir::ForwardProjectorByBinUsingRayTracing, stir::FourierRebinning, stir::GE::RDF_HDF5::BinNormalisationFromGEHDF5, stir::GE::RDF_HDF5::SinglesRatesFromGEHDF5, stir::GibbsQuadraticPenalty< elemT >, stir::InputStreamFromROOTFileForCylindricalPET, stir::InputStreamFromROOTFileForECATPET, stir::InterfileDynamicDiscretisedDensityOutputFileFormat, stir::InterfileOutputFileFormat, stir::InterfileParametricDiscretisedDensityOutputFileFormat< DiscDensityT >, stir::ITKOutputFileFormat, stir::KOSMAPOSLReconstruction< TargetT >, stir::LogcoshPrior< elemT >, stir::MultiDynamicDiscretisedDensityOutputFileFormat, stir::MultiParametricDiscretisedDensityOutputFileFormat< DiscDensityT >, stir::NonseparableConvolutionUsingRealDFTImageFilter< elemT >, stir::OSMAPOSLReconstruction< TargetT >, stir::OSSPSReconstruction< TargetT >, stir::ParametricQuadraticPrior< TargetT >, stir::PatlakPlot, stir::PLSPrior< elemT >, stir::PoissonLogLikelihoodWithLinearKineticModelAndDynamicProjectionData< TargetT >, stir::PoissonLogLikelihoodWithLinearModelForMeanAndDynamicProjData< TargetT >, stir::PoissonLogLikelihoodWithLinearModelForMeanAndGatedProjDataWithMotion< TargetT >, stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBin< TargetT >, stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjData< TargetT >, stir::PostsmoothingBackProjectorByBin, stir::PostsmoothingForwardProjectorByBin, stir::PresmoothingForwardProjectorByBin, stir::ProjectorByBinPairUsingNiftyPET, stir::ProjectorByBinPairUsingParallelproj, stir::ProjectorByBinPairUsingProjMatrixByBin, stir::ProjectorByBinPairUsingSeparateProjectors, stir::ProjMatrixByBinFromFile, stir::ProjMatrixByBinPinholeSPECTUB, stir::ProjMatrixByBinSinglePhoton, stir::ProjMatrixByBinSPECTUB, stir::ProjMatrixByBinUsingInterpolation, stir::ProjMatrixByBinUsingRayTracing, stir::ProjMatrixByBinUsingSolidAngle, stir::ProjMatrixByBinWithPositronRange, stir::ProjMatrixByDenselUsingRayTracing, stir::QuadraticPrior< elemT >, stir::RelativeDifferencePrior< elemT >, stir::RigidObject3DMotionFromPolaris, stir::SeparableConvolutionImageFilter< elemT >, stir::SingleScatterSimulation, stir::SRT2DReconstruction, stir::SRT2DSPECTReconstruction, stir::TrivialBinNormalisation
• RegisterInputFileFormat() : stir::RegisterInputFileFormat< Format >
• RegisterIt() : stir::RegisteredParsingObject< Derived, Base, Parent >::RegisterIt
• registry() : stir::RegisteredObject< Root >
• RegistryType : stir::RegisteredObject< Root >
• RelatedBins() : stir::RelatedBins
• RelatedDensels() : stir::RelatedDensels
• RelatedViewgrams() : stir::RelatedViewgrams< elemT >
• RelativeDifferencePrior() : stir::RelativeDifferencePrior< elemT >
• relaxation_gamma : stir::OSSPSReconstruction< TargetT >
• relaxation_parameter : stir::OSSPSReconstruction< TargetT >
• release_const_data_ptr() : stir::ProjDataInMemory, stir::VectorWithOffset< T >
• release_const_full_data_ptr() : stir::Array< num_dimensions, elemT >
• release_data_ptr() : stir::ProjDataInMemory, stir::VectorWithOffset< T >
• release_full_data_ptr() : stir::Array< num_dimensions, elemT >
• remove_cache_for_integrals_over_activity() : stir::ScatterSimulation
• remove_cache_for_integrals_over_attenuation() : stir::ScatterSimulation
• remove_from_registry() : stir::FactoryRegistry< Key, Factory, Compare >, stir::InputFileFormatRegistry< DataT >
• remove_gaps() : stir::NiftyPETHelper
• remove_key() : stir::KeyParser
• replace_extension() : stir::FilePath
• report() : stir::ROIValues
• report_objective_function_values_interval : stir::IterativeReconstruction< TargetT >
• reserve() : stir::ProjMatrixElemsForOneBin, stir::ProjMatrixElemsForOneDensel, stir::VectorWithOffset< T >
• reset() : stir::CListModeDataLMF, stir::CListModeDataPENN, stir::CListModeDataROOT, stir::CListModeDataSAFIR< CListRecordT >, stir::DataProcessor< DataT >, stir::ecat::CListModeDataECAT8_32bit, stir::ecat::ecat7::CListModeDataECAT< CListRecordT >, stir::GE::RDF_HDF5::CListModeDataGEHDF5, stir::GE::RDF_HDF5::InputStreamWithRecordsFromHDF5< RecordT >, stir::HighResWallClockTimer, stir::InputStreamFromROOTFile, stir::InputStreamWithRecords< RecordT, OptionsT >, stir::InputStreamWithRecordsFromUPENN, stir::InputStreamWithRecordsFromUPENNbin, stir::InputStreamWithRecordsFromUPENNtxt, stir::ListModeData, stir::ListModeData_dummy, stir::Timer
• reset_timers() : stir::TimedObject
• resize() : stir::Array< num_dimensions, elemT >, stir::IndexRange< 1 >, stir::SegmentBySinogram< elemT >, stir::SegmentByView< elemT >, stir::Sinogram< elemT >, stir::VectorWithOffset< T >, stir::Viewgram< elemT >
• rest_iter_type : stir::BeginEndFunction< TopLevelIterT, RestIterT >
• restart_reconstruction_every_scatter_iteration : stir::ScatterEstimation
• restrict_to_cylindrical_FOV : stir::ForwardProjectorByBinUsingRayTracing
• RigidObject3DTransformation() : stir::RigidObject3DTransformation
• RingNumPairs : stir::ProjDataInfoCylindrical, stir::ProjDataInfoGenericNoArcCorr
• RMSE() : stir::RigidObject3DTransformation
• ro3d_ptr : stir::LmToProjDataWithMC
• RootFactory : stir::RegisteredObject< Root >
• RotationValue : stir::PatientPosition
• run() : stir::CorrectProjDataApplication, stir::MatchTrackerAndScanner
• run_Blocks_DOI_test() : stir::ProjDataInfoTests
• run_checks : stir::FilePath
• run_coordinate_test() : stir::ProjDataInfoTests
• run_coordinate_test_for_realistic_scanner() : stir::ProjDataInfoTests
• run_lor_get_s_test() : stir::ProjDataInfoTests
• run_tests() : stir::ArcCorrectionTests, stir::ArrayFilterTests, stir::ArrayTests, stir::BlocksTests, stir::BSpline::BSplines_Tests, stir::BSpline::BSplinesRegularGrid1D_Tests, stir::BSpline::BSplinesRegularGrid_Tests, stir::ByteOrderTests, stir::convert_array_Tests, stir::coordinateTests, stir::DataSymmetriesForBins_PET_CartesianGridTests, stir::DateTimeTest, stir::DetectionPosition_Tests, stir::DetectionPosMapTests, stir::erfTests, stir::FilenameTests, stir::find_fwhm_in_imageTests, stir::FourierTests, stir::GeneralisedPoissonNoiseGeneratorTests, stir::GeometryBlocksOnCylindricalTests, stir::ImagingModalityTests, stir::IndexRange_Tests, stir::integrate_discrete_functionTests, stir::IOTests< A >, stir::IOTests_ITKMulticomponent, stir::IR_filterTests, stir::KeyParserTests, stir::linear_regressionTests, stir::LogCoshPriorTests, stir::MatrixTests, stir::ML_normTests, stir::modellingTests, stir::MultipleProjDataTests, stir::NestedIteratorTests, stir::OutputFileFormatTests, stir::overlap_interpolateTests, stir::PLSPriorTests, stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBinTests, stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjDataTests, stir::ProjDataInfoCylindricalArcCorrTests, stir::ProjDataInfoCylindricalNoArcCorrTests, stir::ProjDataInMemoryTests, stir::ProjDataTests, stir::ProjMatrixByBinUsingInterpolationTests, stir::QuadraticPriorTests, stir::QuaternionTests, stir::RadionuclideTest, stir::RelativeDifferencePriorTests< RDP >, stir::RigidObject3DTransformationTests, stir::ROITests, stir::RunTests, stir::ScannerTests, stir::ScatterSimulationTests, stir::SeparableGaussianArrayFilterTests, stir::SeparableMetzArrayFilterTests, stir::stir_mathTests, stir::TestBSplineTransformation, stir::TestDataProcessorProjectors, stir::TestFBP2D, stir::TestFBP3DRP, stir::TestGPUProjectors, stir::TestOSMAPOSL, stir::TestProjDataInfoSubsets, stir::TestProjDataInfoSubsetsSPECTUB, stir::TOF_Tests, stir::VectorWithOffsetTests, stir::VoxelsOnCartesianGridTests, stir::warp_imageTests, stir::zoom_imageTests
• run_tests_for_objective_function() : stir::GeneralisedPriorTests, stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBinTests, stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjDataTests
• run_transformation() : stir::TestBSplineTransformation
• RunTests() : stir::RunTests