Here is a list of all documented class members with links to the class documentation for each member:

- r -

• radii : stir::Ellipsoid
• Radionuclide() : stir::Radionuclide
• radius_x : stir::EllipsoidalCylinder
• radius_y : stir::EllipsoidalCylinder
• randomise_subset_order : stir::IterativeReconstruction< TargetT >
• randomly_place_scatter_points : stir::ScatterSimulation
• read_blood_frame_data() : stir::BloodFrameData
• read_detectormap_from_file() : stir::DetectorCoordinateMap
• read_from_file() : stir::DiscretisedDensity< num_dimensions, elemT > , stir::ecat::ecat6::ECAT6ImageInputFileFormat , stir::ecat::ecat7::ECAT7DynamicDiscretisedDensityInputFileFormat , stir::ecat::ecat7::ECAT7ImageInputFileFormat , stir::ecat::ecat7::ECAT962ListmodeInputFileFormat , stir::ecat::ecat7::ECAT966ListmodeInputFileFormat , stir::ecat::ECAT8_32bitListmodeInputFileFormat , stir::GE::RDF_HDF5::GEHDF5ListmodeInputFileFormat , stir::InputFileFormat< DataT > , stir::InterfileDynamicDiscretisedDensityInputFileFormat , stir::InterfileImageInputFileFormat , stir::InterfileParametricDiscretisedDensityInputFileFormat , stir::ITKImageInputFileFormat< STIRImageType > , stir::ModelMatrix< num_param > , stir::MultiDynamicDiscretisedDensityInputFileFormat , stir::MultiParametricDiscretisedDensityInputFileFormat , stir::ParametricDiscretisedDensity< DiscDensT > , stir::PENNListmodeInputFileFormat , stir::ProjData , stir::ROOTListmodeInputFileFormat , stir::SAFIRCListmodeInputFileFormat< EventDataType >
• read_from_files() : stir::GatedSpatialTransformation
• read_from_stream() : stir::RegisteredParsingObject< Derived, Base, Parent >
• read_gdef_file() : stir::TimeGateDefinitions
• read_image_data_types() : stir::InterfileImageHeader
• read_list_data() : stir::GE::RDF_HDF5::GEHDF5Wrapper
• read_optional_root_fields : stir::InputStreamFromROOTFile
• read_plasma_data() : stir::PlasmaData
• read_registered_object() : stir::RegisteredObject< Root >
• read_singles() : stir::GE::RDF_HDF5::GEHDF5Wrapper
• read_singles_from_file() : stir::ecat::ecat7::SinglesRatesFromECAT7
• read_singles_from_sgl_file() : stir::ecat::ecat7::SinglesRatesFromSglFile
• ReadGiplHeader() : Image
• rebin() : stir::FourierRebinning , stir::ProjDataRebinning , stir::SinglesRatesForTimeSlices
• recompute_atten_projdata : stir::ScatterEstimation
• recompute_cache : stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeData< TargetT >
• recompute_mask_image : stir::ScatterEstimation
• recompute_mask_projdata : stir::ScatterEstimation
• recon_template_par_filename : stir::ScatterEstimation
• reconstruct() : stir::AnalyticReconstruction , stir::IterativeReconstruction< TargetT > , stir::Reconstruction< TargetT > , stir::ReconstructionTests< TargetT >
• Reconstruction() : stir::Reconstruction< TargetT >
• reconstruction_template_sptr : stir::ScatterEstimation
• ReconstructionTests() : stir::ReconstructionTests< TargetT >
• recycle() : stir::VectorWithOffset< T >
• reduce_memory_usage : stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeData< TargetT >
• reduce_segment_range() : stir::ProjDataInfo , stir::ProjDataInfoCylindrical , stir::ProjDataInfoSubsetByView
• reference_position_is_average_position_in_frame : stir::LmToProjDataWithMC
• registered_name : stir::AbsTimeIntervalFromDynamicData , stir::AbsTimeIntervalFromECAT7ACF , stir::AbsTimeIntervalWithParsing , stir::BackProjectorByBinNiftyPET , stir::BackProjectorByBinParallelproj , stir::BackProjectorByBinUsingInterpolation , stir::BackProjectorByBinUsingProjMatrixByBin , stir::BinNormalisationFromAttenuationImage , stir::BinNormalisationFromML2D , stir::BinNormalisationFromProjData , stir::BinNormalisationSinogramRescaling , stir::Box3D , stir::ChainedBinNormalisation , stir::DiscretisedShape3D , stir::ecat::BinNormalisationFromECAT8 , stir::ecat::ecat6::ECAT6OutputFileFormat , stir::ecat::ecat7::BinNormalisationFromECAT7 , stir::ecat::ecat7::ECAT7DynamicDiscretisedDensityOutputFileFormat , stir::ecat::ecat7::ECAT7OutputFileFormat , stir::ecat::ecat7::ECAT7ParametricDensityOutputFileFormat< DiscretisedDensityT > , stir::ecat::ecat7::SinglesRatesFromECAT7 , stir::ecat::ecat7::SinglesRatesFromSglFile , stir::Ellipsoid , stir::EllipsoidalCylinder , stir::FBP2DReconstruction , stir::FBP3DRPReconstruction , stir::FilterRootPrior< DataT > , stir::ForwardProjectorByBinNiftyPET , stir::ForwardProjectorByBinParallelproj , stir::ForwardProjectorByBinUsingProjMatrixByBin , stir::ForwardProjectorByBinUsingRayTracing , stir::FourierRebinning , stir::GE::RDF_HDF5::BinNormalisationFromGEHDF5 , stir::GE::RDF_HDF5::SinglesRatesFromGEHDF5 , stir::InputStreamFromROOTFileForCylindricalPET , stir::InputStreamFromROOTFileForECATPET , stir::InterfileDynamicDiscretisedDensityOutputFileFormat , stir::InterfileOutputFileFormat , stir::InterfileParametricDiscretisedDensityOutputFileFormat< DiscDensityT > , stir::ITKOutputFileFormat , stir::KOSMAPOSLReconstruction< TargetT > , stir::LogcoshPrior< elemT > , stir::MultiDynamicDiscretisedDensityOutputFileFormat , stir::MultiParametricDiscretisedDensityOutputFileFormat< DiscDensityT > , stir::NonseparableConvolutionUsingRealDFTImageFilter< elemT > , stir::OSMAPOSLReconstruction< TargetT > , stir::OSSPSReconstruction< TargetT > , stir::ParametricQuadraticPrior< TargetT > , stir::PatlakPlot , stir::PLSPrior< elemT > , stir::PoissonLogLikelihoodWithLinearKineticModelAndDynamicProjectionData< TargetT > , stir::PoissonLogLikelihoodWithLinearModelForMeanAndDynamicProjData< TargetT > , stir::PoissonLogLikelihoodWithLinearModelForMeanAndGatedProjDataWithMotion< TargetT > , stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBin< TargetT > , stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjData< TargetT > , stir::PostsmoothingBackProjectorByBin , stir::PostsmoothingForwardProjectorByBin , stir::PresmoothingForwardProjectorByBin , stir::ProjectorByBinPairUsingNiftyPET , stir::ProjectorByBinPairUsingParallelproj , stir::ProjectorByBinPairUsingProjMatrixByBin , stir::ProjectorByBinPairUsingSeparateProjectors , stir::ProjMatrixByBinFromFile , stir::ProjMatrixByBinPinholeSPECTUB , stir::ProjMatrixByBinSinglePhoton , stir::ProjMatrixByBinSPECTUB , stir::ProjMatrixByBinUsingInterpolation , stir::ProjMatrixByBinUsingRayTracing , stir::ProjMatrixByBinUsingSolidAngle , stir::ProjMatrixByBinWithPositronRange , stir::ProjMatrixByDenselUsingRayTracing , stir::QuadraticPrior< elemT > , stir::RelativeDifferencePrior< elemT > , stir::RigidObject3DMotionFromPolaris , stir::SeparableConvolutionImageFilter< elemT > , stir::SingleScatterSimulation , stir::TrivialBinNormalisation
• RegisterInputFileFormat() : stir::RegisterInputFileFormat< Format >
• RegisterIt() : stir::RegisteredParsingObject< Derived, Base, Parent >::RegisterIt
• registry() : stir::RegisteredObject< Root >
• RegistryType : stir::RegisteredObject< Root >
• RelatedBins() : stir::RelatedBins
• RelatedDensels() : stir::RelatedDensels
• RelatedViewgrams() : stir::RelatedViewgrams< elemT >
• RelativeDifferencePrior() : stir::RelativeDifferencePrior< elemT >
• relaxation_gamma : stir::OSSPSReconstruction< TargetT >
• relaxation_parameter : stir::OSSPSReconstruction< TargetT >
• release_const_data_ptr() : stir::ProjDataInMemory , stir::VectorWithOffset< T >
• release_const_full_data_ptr() : stir::Array< num_dimensions, elemT > , stir::Array< 1, elemT >
• release_data_ptr() : stir::ProjDataInMemory , stir::VectorWithOffset< T >
• release_full_data_ptr() : stir::Array< num_dimensions, elemT > , stir::Array< 1, elemT >
• remove_cache_for_integrals_over_activity() : stir::ScatterSimulation
• remove_cache_for_integrals_over_attenuation() : stir::ScatterSimulation
• remove_from_registry() : stir::FactoryRegistry< Key, Factory, Compare > , stir::InputFileFormatRegistry< DataT >
• remove_gaps() : stir::NiftyPETHelper
• remove_key() : stir::KeyParser
• replace_extension() : stir::FilePath
• report() : stir::ROIValues
• report_objective_function_values_interval : stir::IterativeReconstruction< TargetT >
• reserve() : stir::ProjMatrixElemsForOneBin , stir::ProjMatrixElemsForOneDensel , stir::VectorWithOffset< T >
• reset() : stir::CListModeDataLMF , stir::CListModeDataPENN , stir::CListModeDataROOT , stir::CListModeDataSAFIR< CListRecordT > , stir::DataProcessor< DataT > , stir::ecat::CListModeDataECAT8_32bit , stir::ecat::ecat7::CListModeDataECAT< CListRecordT > , stir::GE::RDF_HDF5::CListModeDataGEHDF5 , stir::GE::RDF_HDF5::InputStreamWithRecordsFromHDF5< RecordT > , stir::HighResWallClockTimer , stir::InputStreamFromROOTFile , stir::InputStreamWithRecords< RecordT, OptionsT > , stir::InputStreamWithRecordsFromUPENN , stir::InputStreamWithRecordsFromUPENNbin , stir::InputStreamWithRecordsFromUPENNtxt , stir::ListModeData , stir::ListModeData_dummy , stir::Timer
• reset_timers() : stir::TimedObject
• resize() : stir::Array< num_dimensions, elemT > , stir::Array< 1, elemT > , stir::IndexRange< 1 > , stir::SegmentBySinogram< elemT > , stir::SegmentByView< elemT > , stir::Sinogram< elemT > , stir::VectorWithOffset< T > , stir::Viewgram< elemT >
• rest_iter_type : stir::BeginEndFunction< TopLevelIterT, RestIterT >
• restart_reconstruction_every_scatter_iteration : stir::ScatterEstimation
• restrict_to_cylindrical_FOV : stir::ForwardProjectorByBinUsingRayTracing
• RigidObject3DTransformation() : stir::RigidObject3DTransformation
• RingNumPairs : stir::ProjDataInfoCylindrical , stir::ProjDataInfoGeneric
• RMSE() : stir::RigidObject3DTransformation
• ro3d_ptr : stir::LmToProjDataWithMC
• RootFactory : stir::RegisteredObject< Root >
• RotationValue : stir::PatientPosition
• run() : stir::CorrectProjDataApplication , stir::MatchTrackerAndScanner
• run_Blocks_DOI_test() : stir::ProjDataInfoTests
• run_checks : stir::FilePath
• run_coordinate_test() : stir::ProjDataInfoTests
• run_coordinate_test_for_realistic_scanner() : stir::ProjDataInfoTests
• run_lor_get_s_test() : stir::ProjDataInfoTests
• run_tests() : stir::ArcCorrectionTests , stir::ArrayFilterTests , stir::ArrayTests , stir::BlocksTests , stir::BSpline::BSplines_Tests , stir::BSpline::BSplinesRegularGrid1D_Tests , stir::BSpline::BSplinesRegularGrid_Tests , stir::ByteOrderTests , stir::convert_array_Tests , stir::coordinateTests , stir::DataSymmetriesForBins_PET_CartesianGridTests , stir::DateTimeTest , stir::DetectionPosition_Tests , stir::DetectionPosMapTests , stir::erfTests , stir::FilenameTests , stir::find_fwhm_in_imageTests , stir::FourierTests , stir::GeneralisedPoissonNoiseGeneratorTests , stir::GeometryBlocksOnCylindricalTests , stir::ImagingModalityTests , stir::IndexRange_Tests , stir::integrate_discrete_functionTests , stir::IOTests< A > , stir::IOTests_ITKMulticomponent , stir::IR_filterTests , stir::KeyParserTests , stir::linear_regressionTests , stir::LogCoshPriorTests , stir::MatrixTests , stir::ML_normTests , stir::modellingTests , stir::MultipleProjDataTests , stir::NestedIteratorTests , stir::OutputFileFormatTests , stir::overlap_interpolateTests , stir::PLSPriorTests , stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBinTests , stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjDataTests , stir::ProjDataInfoCylindricalArcCorrTests , stir::ProjDataInfoCylindricalNoArcCorrTests , stir::ProjDataInMemoryTests , stir::ProjDataTests , stir::ProjMatrixByBinUsingInterpolationTests , stir::QuadraticPriorTests , stir::QuaternionTests , stir::RadionuclideTest , stir::RelativeDifferencePriorTests< RDP > , stir::RigidObject3DTransformationTests , stir::ROITests , stir::RunTests , stir::ScannerTests , stir::ScatterSimulationTests , stir::SeparableGaussianArrayFilterTests , stir::SeparableMetzArrayFilterTests , stir::stir_mathTests , stir::TestBSplineTransformation , stir::TestDataProcessorProjectors , stir::TestFBP2D , stir::TestFBP3DRP , stir::TestGPUProjectors , stir::TestOSMAPOSL , stir::TestProjDataInfoSubsets , stir::TOF_Tests , stir::VectorWithOffsetTests , stir::VoxelsOnCartesianGridTests , stir::warp_imageTests , stir::zoom_imageTests
• run_tests_for_objective_function() : stir::GeneralisedPriorTests , stir::PoissonLogLikelihoodWithLinearModelForMeanAndListModeDataWithProjMatrixByBinTests , stir::PoissonLogLikelihoodWithLinearModelForMeanAndProjDataTests
• run_transformation() : stir::TestBSplineTransformation
• RunTests() : stir::RunTests